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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|68367410
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESSGPLDGH IRFQCLLLES LCLAAGGDHR KVVVRKQQYK VGEIMPPVCA ARDSYWTLLS  60
   61 LSEDKHWPLA KLTEVLPLRG PMDLPVVLFL LWGLLLDLLT GAVGGILYRV HEEQPPSTLI 120
  121 GSLAADQGLP DTGHLYKLEV GAPYLRVDGK TGDIFTTEIP IDRETLKDCR NKGKPCFLEF 180
  181 EVSVTDLIQN QSPRLIEGRI EVQDINDNTP QFPSPVLTLS VPENTHMGAL FSIPLATDKD 240
  241 TERNGVADYT LTAGPEAVAL FGLQVAEDRG EKLPQLIVLG SLDRELKDSY DLTIKAVDGG 300
  301 NPPRYSSALL RVVIADANDN APKFEKSSYE AEVAENSPIG HSVLQVKAND SDLGPNGEIE 360
  361 YTLHQAIDPV PKLLRIDRSS GIIYVKGPLD REEINNLKFY VVARDKGPSP KSSKTYVSID 420
  421 VTDQNDNAPA VEIRGIGLVT HSDGVANISE DMPVGTAVAL VQVSDKDEGE NAVVTCVVAG 480
  481 DVPFQLRPAS DSSVDNKRKY FLQTTTPLDY ERVRDYRVEI VAVDSGNPAL SSTNSLKVQV 540
  541 TDTNDNSPIF SPTLFEVEFA EENQPGEKVV EVVASDADSG TNAELVYSII ADSSTRGLFE 600
  601 IDPNSGEVRP RSPFDRDHKD RYEFRVTAAD KGVPSHRAPV GMVTVQDMDE GENAQVQLSV 660
  661 EPDVGKFVIQ NGTGTILSSI SFDREKESSY TFTLKAVDGG DPHRSSYVGV TINVLDENDN 720
  721 APVVTKPSNS SFIQDIDSGS NAELVYSIAG GNPHDLFYIS PSNGEITLTK ELTRKHSGLH 780
  781 RLVIKVSDRG KPSRHAIALV HIYVNETIAN VSHVEALVGH SLYTPLDMDI AGDPDYGLAA 840
  841 QRSNIVYGSL AGVAGVVTVI VVVVFIRHRL QRETKSGYQA GKKETKDLYA PKQGPKSGKG 900
  901 RKGKKGKPPK SPKPLGEDEE VSLQKSLKFN LDGVNDSPRI HLPLTYPPGS PDLGRHYRSN 960
  961 SPLPSIQLQA QSPSASQKHQ AVQELRAANT FVGTGGDDNS TGSDQYSDYS YKTNQPKYST1020
 1021 KTVDLVLQLL CVCMMERSTQ ELFLNFMIVL ITVLLMWLLV KQYQDS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle