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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|68367122, gi|...
Protein type: Transmembrane
Type Confidence: 0.71
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLINKDLRL QDVTLMYLTV LATVVVLLVA SYQAPAGQSR PTLAYHIPLD PSGQLELSWN  60
   61 ISYPKQEVLL EVKVKELHHG IILGMSDRGE PTNADLVILW DDGHKSYFGD AWSDSEGRVT 120
  121 LDTQQDYQLL ETHQSTEGFF LLFKRSFSTC DPHDYIIEEG TVHIIYTMLE HPILSLHELN 180
  181 ISRLQPGVQR VLLLRPDTPS PHLPKDVRTL EVLAPDVIIP TQETTYWCHI YQLPPNLPKN 240
  241 HIVMYESVIT PGNEAIVHHI EVFECSPQMD IVPQYSGSCD SKMKPRNLNY CRHVLAAWAM 300
  301 GAEPFYYPAD AGLPMGGEGS SRFLRLEVHY HNPLLLSGRR DSSGIRLWYS PSLRRFDAGI 360
  361 MELGLVYTPV MAIPPRQRSF QLTGYCTAKC TQTALPVGGI HIFASQLHTH LAGLGVRTVL 420
  421 VRGGQEVEVV QEDKHFSTHY QIIRVLQKMV TVLPGDALLT TCRFNTEDRS KVTVGGFGIM 480
  481 EEMCVNYVHY YPRTQLELCK SHVDTDYLQK YFSLINRFQG RESCSCPQTS VEEQFSSVSW 540
  541 DSFSGEVLNS LYVTAPFSMH CNQSTAQLFP GDWEKQEIPV VTAQLQRAPY PCEINRRVAS 600
  601 NNDSPTEVRA DSSG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle