YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|141796338, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSLSGKSVL TLCRAFSSPL LLPPAMVGAV RVCHTGVNSK GTVFTRKRGY DITRNPHLNK  60
   61 GMAFTLEERL QLGIHGLLPP CFLSQDVQVL RVMKSYETRS NPLDKYILLM TLQDRNEKLF 120
  121 YRVLTSDIEE FMPIVYTPTV GLACQQYGLA FRRPRGLFIT IHDKGHIATM LNSWPEEDIK 180
  181 AIVVTDGERI LGLGDLGGYG MGIPVGKLAL YTACGGVPPQ QCLPVLLDVG TDNQTLLDDP 240
  241 LYIGLKHKRV RGKEYDDLID EFMQAVTDKY GMNCLIQFED FANSNAFRIL NKYRNRYCTF 300
  301 NDDIQGTASV AVAGILAALK ITKNKLSDHK FVFQGAGEAA LGIAHLLIMA MAKEGIPHAE 360
  361 AAQRIWMVDS KGLIVKGRSH LNHEKEEFAH DHPHIKTLEE VVETIKPTAI IGVAAIGGAF 420
  421 TEKIIKNMAA NNERPIIFAL SNPTSKAECT AEQCYTLTEG RGIFASGSPF KKVTLADGRS 480
  481 FYPGQGNNAY VFPGVALGVI ACGVRHISDD IFLTTAEAIS EMVTEEHLAE GRLYPPLKTI 540
  541 REVSFKIAVK IVDHAYKQGI ASWYPEPKDK EAFILSHVYN SDYDSFTLDS YSWPKDAMKV 600
  601 QNV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle