YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|68365546
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.46
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEYAREPCP WRIVDDCGGA FTMGAIGGGV FQTVKGFRNA PVGVRHRLRG SANAVRVRAP  60
   61 QIGGDFAVWG GLFSTIDCGL VRLRGKEDPW NSITSGAMTG AILAARSGPL AMVGSAMMGG 120
  121 ILLALIEGFG ILLTRYTAQQ FQNSSPIVED PKQLPPKEEA RGYGQYQ

Type	Start	End	Confidence
Cytoplasmic	1	101	0.55
Transmembrane Helix	102	134	0.73
Non-Cytoplasmic	135	167	0.46