YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|169153952, gi...
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKANEQADM LFIESEPENR LRLQYRSLRR QVLFIQTFSV LFCVTCCTFT LMYHANASSC  60
   61 KDNIAEEPPR TEMQRIESNR RDTTFIHLKV KHNILAVKTR DVPWTKYSTQ DLPDYSGYFA 120
  121 LSEDGTSLEV KRSGTYKVSL QITYRGLDNY IKETTLQQDI KTYSHGYEAP IFLLTSMETL 180
  181 NFTSPYWKKS IFSEGIFSLE AGDKLSVESN NLPLIDRFHQ TTFFVVYPHF SSW

Type	Start	End	Confidence
Cytoplasmic	1	31	0.91
Transmembrane Helix	32	54	0.89
Non-Cytoplasmic	55	233	0.97