YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|68364966
Protein type:	Transmembrane
Type Confidence:	0.57
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLFIISLYP NHNDTELIYL FCWYLFSSGI SRDHWHKRRK TGGKRKPYHK KRKYELGRPP  60
   61 ANTKIGPRRI HTVRVRGGNK KYRALRLDSG NFSWGSECCT RKTRIIDVVY NASNNELVRT 120
  121 KTLVKNCIVL VDSAPYRQWY EAHYAIPLGR KKGAKLTPEE EEILNKKRSK KVQKKIEGRR 180
  181 KKSKISSLLE EQFLQGKLLA CIASRPGQCG RADGYILEGK ELEFYLRKIK AKKGK

Type	Start	End	Confidence
Non-Cytoplasmic	1	16	0.97
Transmembrane Helix	17	36	0.54
Cytoplasmic	37	235	0.56