YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|68364774, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPTCHAKRLQ IMPGFMLKVP SWRSVCVLYS LCCVLILPDN TEGARARCGR ELVDDLEFVC  60
   61 GDRGFYIGKP GAARSGGPRS RGKGIVDQCC VRGCDLQHLE LYCAKSKKVR RDVPASVLQT 120
  121 PEDQFWLVFQ RRYQKLADLQ RDEESASQRI RERTLYQQNL LNTKTSTQTS STHLSSTTET 180
  181 PTFISHIR

Type	Start	End	Confidence
Signal Peptide	1	43	0.85
N-region	1	34
H-region	35	40
C-region	41	43
Cleavage Site	43	44
Non-Cytoplasmic	44	188	0.98