YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|68363908
Protein type:	Transmembrane
Type Confidence:	0.74
Topology Confidence:	0.36
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVVELHGVLR VILEPLLGNM PLVGAFSLFF LKKPKQGEEE VASNHSAAFP IGAVASGIWE  60
   61 LHPKIGDLIL AHLHKKCPYA VPHYPPMESG TSVEDYQKIL GYRVDEGKVE GQDSFLKRMS 120
  121 GMIRLYAAII QMRWPYSSKQ GPHPHGLNHG WRWMAQILNM EPLADITATI LFDFLEVCGN 180
  181 ALMKQYRVQF WKLILIINEE YFPRYLCFAS ILHFTCIHWL QNIE

Type	Start	End	Confidence
Cytoplasmic	1	10	0.36
Transmembrane Helix	11	30	0.49
Non-Cytoplasmic	31	224	0.49