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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|68362886
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALRKDPSLQ AELTKWCKAA SIDSTHALIL LNVPVYTEVA EIEDVMETVK ALGRVRVRDT  60
   61 REGPTAQSMM VLCECRQATD STRIPPEVTR GEKSEPWSVI VIQPSESASN TDAEGFSEKL 120
  121 TKFLMEEGKT FSDVKALITP HSAGDSSPES IIRAMGEVLE KTIKPTSDGN AYRRLRTFSA 180
  181 IVPTPIGEEN MDNWIDQARL MITECDCTEK EKRRRIMESL KGPAMEIVRA VRFSNPEAGA 240
  241 LEYVEALESS FGSSESGEDL YFKFRLMRQN AGEALSEFLR RIDKALKKVV ERNGLSFRMA 300
  301 DKVRVEQLIR GAVNSDLMLL QLRLRERTAC PPSFLSLLKE IREAEESEAS RHRMSAKAKS 360
  361 IQHCDETTST SVIQELKGEI QELRAHLCGV MPKTVSTSSL VVKSREKPNQ MEKTEDVEVQ 420
  421 ELKKQVQYLQ QQLAVMSVSP SQESSIPELW EMRLRQKLAV RSDVFSTNEW DVGLAQGVEH 480
  481 NIRLTDTKPF RERSRRIAPA DIEDVRRHIK ELLEAGIITE SRSQYASPIV IARKKSGAVR 540
  541 MCIDYRTLNA RTIPDQYTTP RIDDALDCLV GSKWFSVLDL RSGYYQIAMA EEDKEKTAFI 600
  601 CPLGFFQFER MPQGITGAPA TFQRLMEKAV GDMHLLQVIV YLDDIIVFGR TLEEHEERLL 660
  661 KVLDRLRECG LKVSIDKCQF CQSQVRYVGH IVSAAGVSPD PAKVEAVTRW KMPTDLKSLR 720
  721 SFLGFCGFYR RFIKDYSAIV RPLTELTKGY PPTSGQNKKT ADVRKYHKTS EPFGERWDDN 780
  781 CTAAFHKIIY CLTHAPVLAF ADPNKSYVLH VDASLNGLGA VLNQEHPGGL RPVAYASRKL 840
  841 SASEQRYPIH QLEFLALKWA VVDKFHDYLY GAQFVVKTDN NPLTYVLSSA KLSATGHRCI 900
  901 PEAFACPTSL SFSPMEQLSH EELSKAQDED PGDPQPERFN QTLLSMLGTL NPTEKHRWSQ 960
  961 HINRLVHAYN CTKNDATGYS PYYLLFGREA RLPVDVCFGT SPDGKGAGSH RQYVERMKSE1020
 1021 LQQAYQLATE TAQKSQKRNK RLYDKHIKHQ TLAVGDRVLT RNLGMTGKNK LGDKWNSVPY1080
 1081 LIVEKLNNLP VYRLKPESGM GSVRTLHRDH LLPVGDDVRL SDSGKIQNTA APTEIRTESV1140
 1141 GRKYGRGLKE INQNMTGSGL RNDSDSEEDD LWYYYPNRVD ETQKYVTQEE SSINEGAVYN1200
 1201 KDELETPAAE MDDTSVTDQG HEAVLEQTPE ELEDPALEGG DPGTANTTRE VVEHVHVRPK1260
 1261 RNTRPIDRLS YDCLGRPTNK SLTLVHRGMV VKVQGGDSSP KLVVLSVVLF GLPYSSEQSC1320
 1321 SVTLVDHGRG YLGILVSCLI CESAIMWLSM RGSILYTQPR EAVQYVLYIR LAILLVELVY1380
 1381 AVVGIAWLVQ YYQPCPDITA KNLALGIVAC NWLVIFSVCF TMMCTFDPTG RTFVKLKATR1440
 1441 RRQRNLTTYT LRHRLEEGQA SSWSRRLKFF MCCTRAKDTQ SDAYSEVASL FAEFFRDLDI1500
 1501 VPSDIIAGLV LLRQRQRAKR SAILDQANND VLAFLSGMPV TRNTKYLDLK NSTEMAMYKE1560
 1561 VCYYMLFAMA AYGWPVYLLR KPACGLCRLV STCSCNTSVS SSRLSQSVTV EEDNCCGCNV1620
 1621 LAIRRQFLDR DLKEVQIVYT SCHDAVYETP FFVAVDHAKK KVVISIRGTL SPKDALTDLT1680
 1681 GDSERLPVEE QHGTWLGHKG MVYSAEYIKK KLEQEMILSQ AFGRDLSKGT MHYGLVIVGH1740
 1741 SLGAGTAAIL SFLLRPQYPS LQCYSYSPPG GLLSEDAMEY SKEFVTSVVL GKDLVPRIGL1800
 1801 SQLEGFRRHL LEVLQKSNKP KWRIIAGGTK CIPKSELPMD DEAPVSQGVT PSSSRLWLHP1860
 1861 SDLSIALSAS TPLFPPGRVI HVVHNHPPEM CCGQEEPTYS ALWGDNKAFD EVIISPAMLN1920
 1921 EHMPHVVMDG LNKVLENYNK GKTALLSAAK IMVSPTEVDL NPETIFLDTS NSPQPTPATH1980
 1981 HRRNSSVRSC ARSEISLDGF SECPPPPVPI VLTGARERLA VELRERKAPL AIMESLSDAE2040
 2041 SVYSLDSRRS SAALRGSPCL GSLPFPLDAP IPEENPSLSS RTELLAAEGL TQDLGEAGPY2100
 2101 IPTPPEPEEP SNDIPYNNEY FTPELKSTTD PETDSSVVPD SQDSYRVASR TGSRPEKLRE2160
 2161 FEEKEVKVDL SQTLPAVTPL SNGTPSQAVL EFAQYLDSLF RLDGSSSPPL ELSDAESESG2220
 2221 RGSYSQAEEH QEEQRVKNAD KLLARAALEP NLVPKPPRTF AGSADPSSGI SLSPSFPLSS2280
 2281 SGELNDFSPA DGVLPVNHTS TLRTSAASPN PKETALSSMV 

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