YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|148725274, gi...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQDNKPDYFY QRNPKDIMSS AVPRSGFVVF CVLLVVTLAL YPVLRTLGVQ IYSAFTGKYV  60
   61 SGYHSLLLVN CPTEQTARDI GRIIMEKRLA ACVNIFPRTA TMYYWKGEIR DATEILLLVR 120
  121 TKTSLVQRLM TYITAIHPYD IPEIITFPIN DGSQHYLKWI AEAVTDS

Type	Start	End	Confidence
Cytoplasmic	1	20	0.86
Transmembrane Helix	21	43	0.89
Non-Cytoplasmic	44	167	0.79