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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|68359961
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTGQSAPEGS PCSHRLSVQT QEDEQDRAES VLSRSQSACD DTSSELQRVA ALEPQDAPSR  60
   61 NSFRGRGALS RLVTLVVTLR EWAHRSLVEE EERPDSFLER FRGPEVRAPP SRRSNNQPDA 120
  121 NGNTKGITKR GRILQKDSAA SHTSASTSKF LKAKKVKEET LKMNPKNLDE KQWETFIVAS 180
  181 SDDTYYYWLF FIAAAVLYNW VLLVARACFD QLQSETPIVW LVLDYICDFV YILDSCIRLR 240
  241 TGYLEQGLLV KDLAKLRDSY IHTFQFKLDV LSILPTDLAY IITGINTPQL RFNRLLRFSR 300
  301 MFEFFNRTET RTNYPNIFRI WNLVLYILVI IHWNACIFYA ISKSLGFGSD EWVYPNISST 360
  361 EEGALRRSYI YCFYWSTLTL TTIGEMPPPV RDEEYVFVVF DFLVGVLIFA TIVGNVGSMI 420
  421 SNMNATRAEF QARIDAIKHY MHFRKVSRHL ETRVIKWFDY LWTNQKAVDE QEVLKNLPDK 480
  481 LRAEIAINVH LTTLKKVRIF QDCEAGLLVE LVLKLRPQVY SPGDYICRKG DIGKEMYIIK 540
  541 EGKLAVVADD GVTQFALLTA GGCFGEISIL NIQGSKMGNR RTANIRSIGY SDLFCLSKDD 600
  601 LMEAVIEYPD AQRVLEERGR EILRKQGLLD EGIAQGGLLV MDTDEKVERL EGSLDILQAR 660
  661 FARLLGEFTA TQRKLKQRIT ALERQLCHTG IGLVSDHEMD VESNVNSPRT NSTA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle