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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|68359567
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFTYQKNRSQ SLFPNCKLAN SESTDDILPF AKKGLLKHWR SLNELQEDIY NVFDDVYEEE  60
   61 VQRHAEPTLW FTSTSPSRNC TLNLNVGGKS YRITYKMAAR YPQTRLGRLA MSTDLNMKMD 120
  121 LCDDYVVKDN EYFFDRDPDV FNSIFNFYRT GVLWIKDELC PRNFLEEISY WGVRIKYSQR 180
  181 CCRILLEEKN DELCEQLKVQ KELERELEIE ENEEAFDDMI LGESRRSLWD FMEKPFSSIP 240
  241 AKLMAVTSSM FVLISLVTMT LSTVEEMENI ESEGKNYGEF VENLCITFFT IEYLLRVIST 300
  301 PDICRFFKSM LNAVDLMAIL PQILQFMLEN FETFRSRNQS ADMETVGQVG KVGQVLRIMR 360
  361 LLRIFRVLKL ARHSTGLRAF GFTLKQCYQQ VGCLFLFIAM GIFTFSAMVY SVEYDVPKTN 420
  421 FTSIPHSWWW ASVSISTVGY GDMYPETLLG RIFAFGCISF GIILNGLPIS ILFNKFSDYY 480
  481 AKLKSHECPS HMKNRGNVNF IPRAKKKLRD PLGGGVVSAR SYKCHFFFGV LLRVSDLCRL 540
  541 KAFLKSSEMV PPVQVSPLIK TARWSALLVG IIYGKRRYDN LKPIAEEERR IEEEEKKVRE 600
  601 EQERIAKQLA EANEDTILK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle