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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|61744145, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLLSGSVC FLYVLSALVP ADSTQQFNTV YRVCARGYFL SDQETCLPCN CKGHADSCED  60
   61 ITGICIDCRD HTLGDFCELC EDRFLPVFLP DGTFMCRPCA CPLSLESNNF AAHCDRRGEF 120
  121 LRCVCQDGYA GHYCERCAPG YYGNPMELGN SCKKCDCNGN SDPNLIFNEC HNVTGKCLNC 180
  181 WGDTAGDNCE RCAPGFYGDA ISAKDCQECQ CNKCGTASCD DRSGVCHCKP GVTGQLCDRC 240
  241 EDGHSGFCTC MGCRRCECAS AALRATCHPL THSCQCRPGA GGRYCERCLP GFWDYSPSGC 300
  301 RKCDCPEENC DLHTGECLPE LSQISECNIS CDACIWNLIG DIRQSNKTLD QVRNSVLNIS 360
  361 TGAAANDRLK YYNYTAHRLQ AQFRGWRKNY AMMSGDTDVL EEETQNLLTD MDQFAEEENE 420
  421 VQNLGKQVDQ ETLNSSTRAK TLTANLSSLN VLIEDMIRDW ELYGVYQELD PQVKLQKLAE 480
  481 AERILGWMRK LNLSPKEPLA TDESSEAHEL LRRVRSFDRN LMTTQGRLPP MQEVLGRFTS 540
  541 KLLQAQDLLS KAEDALKQAI NKYKSNQLKL QRREAQQQRL KDIQDGVDQT IVNAAAVLSE 600
  601 ANHTVLEVED VITNVREQHA EIDGARVLLE RRTEKISQSD RELVLRAEDH ADQLQRHAEE 660
  661 PQHNLKGSDA NGHVQKALNA FNVYDNIVKS VDDANITSLT ALNISSRTHG AVDKLSSQLN 720
  721 LMRSQSAKVL NEASSLHFQQ QDSESIVLDN KKYIEETNEM MDGSSKKIAK IITEINAIHT 780
  781 DRTPKRLQFT QEVAEGTLNR SAEVLEKVTP ILKRVEQWDG NMKSEAYSAA AFDRTVLSAG 840
  841 EAVKDLSAIV PELLSKLRVV EEKKPVNNVT TSIMKIRGLI AQARSVAKKV QVSMKFDGQS 900
  901 AVEVHPHTNL DELKTVTSIS FYIRVDPDKD PIEDRFLLYL GDKQGKRDYM GLAIKNDNLV 960
  961 YVYKLGEEEV EIPLSSKPVS SWPPVFNFVK VERLGRHGKV FLTVPSQDTT AEQKFIQKGE1020
 1021 PVGTDTLFDL DPKDMVFIVG GVPPGVTVPP ILSLAPFVGC IELETLNNDV ISLYNFKQLH1080
 1081 KMDVKASAPC PRHKLAFSQS RVTSYLFDGT GYALVNNIER RGKIGVVTRF DIEVRTVANN1140
 1141 GILFLMVNET NFFVLELKNG FLRLMYDFGF ANGPVIIETN LAKLQINDAR YHEVSVIYHH1200
 1201 SKKIILLVDR SHVKSFESEK KPLPFSDIYI GGAPSRILQS RPELTSLIGL KGCVKGFQFQ1260
 1261 KEDFNLLEEQ GTIGISSGCP EESFMSHKAY FTGNGYLSSS DKISPFQSFE GGLSFKTLQP1320
 1321 SGLLFYHRDG SDEFSLSLEN GAVVLQAKGT RVKSQKKHYS DGRSHFLVAS VTNQKYEIVI1380
 1381 DDKDKQDKKK PSSTSQSDNT PKAFYYGGST SSSILNLTGC ISYAYISRQD RDIEPEDFQR1440
 1441 YSENVQASLQ DCPIERPPSA LLKDSRDSSR RSAGHSRKVG RDESGLPHGL KSNPLNIPEK1500
 1501 EEASCYLSSR PRATPHANHY GGSAHSRHEY TGIASAIKHE SHFSLSLKTR SAFGLIFYLA1560
 1561 DASGENSMAL FLTHARLVFT FSSGQSQVRI RSKEKYNDGQ WHDIIFIRAG NMGRMLIDGL1620
 1621 TVLEDRAPGR NTSLLVQDPL YVGGVPPHQA MKNIQRTSVS SFTGCVRSLQ LNGRSLTSAS1680
 1681 HSFGVTPCYE GPSEPGTYFA EEGGYVLLDD SFHFGSSFKM AMEVRPRVAS GVLLHVFMEQ1740
 1741 KEYLTVYIYQ SQVVVVVNNG IAEFSTHVSP TQEICDGNWH KITVIRDGSV LQLDVDSEVN1800
 1801 HVVGSVSDAA QSSSSPVFIG GAPDSMLSHS LLSRRGFTGC MRSVSVNETP VSFSKAVLVS1860
 1861 GSVGVGACPS A

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