YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|82659447
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AWCFKAEHHG GKDYHDPPPA PLIDGEELTK WSFYRAVIAE FIATLLFLYV TVLTVIGYKS  60
   61 QTDPNLNTDQ CGGVGILGIA WAFGGMIFIL VYCTAGISGG HINPAVTFGL FLARKVSLIR 120
  121 ALLYMVAQCL GAICGVGLVK AFQSSYYNRY GGGANELADG YNKGTGLGTE IIGTFVLVYT 180
  181 VFSATDPKRS ARDSHVPVLA PLPIGFAVFM VHLATIPITG TGINPARSFG AAVIYNKDKA 240
  241 WDDQWIFWVG PFIGAAIAAF YHQFVLRAGA IKALGSFRSN A

Type	Start	End	Confidence
Cytoplasmic	1	36	0.92
Transmembrane Helix	37	58	0.90
Non-Cytoplasmic	59	78	0.84
Transmembrane Helix	79	102	0.84
Cytoplasmic	103	120	0.81
Transmembrane Helix	121	142	0.93
Non-Cytoplasmic	143	163	0.92
Transmembrane Helix	164	183	0.91
Cytoplasmic	184	195	0.84
Transmembrane Helix	196	216	0.89
Non-Cytoplasmic	217	244	0.87
Transmembrane Helix	245	266	0.90
Cytoplasmic	267	281	0.92