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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|190337394, gi...
Protein type: Transmembrane
Type Confidence: 0.87
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVMETLLMP VSITGVLLSA VLLFLVVYLI SISSSSPEDP PGPKPLPLLG NLHTLDLKNL  60
   61 HVSLWELSKK YGPVFKVHLG RKKVVVLAGY KTVKQALVNQ AEEFGERDIT PIFQDCNQGQ 120
  121 GIVFANGERW RTMRRFALST LRDFGMGKKL SEEKIVDETR YLREVFMKFE GQPFDTTQPV 180
  181 NYAVSNIISA IVYGKRFEYE DPAFQDMVNK ANMNIRMIGS AVIQIYNMCP FLGPWIKTWR 240
  241 QLMKNMESTR RQIQTLADVL QETLNPLDCR GLIDSFLIRK QNIQETGEKD SSFNDQNLLI 300
  301 TVSNLFAAGT DTTGTTLRWG LMLMAKYPQI QDRVQEEIDQ VLGGREPVAE DRKNLPYTDA 360
  361 VIHETQRLAN ILPLNLPHKT SCDVTFNGYF IKKGTCVLPL LTSVLRDETE WETPDTFNPQ 420
  421 HFLDEKGQLI KRDAFMPFSA GRRACLGESL ARMELFLFFT SLLQYFRFSP PPGASEDELD 480
  481 LTPVVGLTLN PSPHKLCAVI RAERQLN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle