YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|85774457, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPQPPPRRD RLALGIVAFI FGGLFLVFFG FLLLAFGAVR GESPRLGSGP RVGVIDVKGT  60
   61 IGGGPERDET EDILKRIRRF ADDGDLKAVV IRVDSPGGSV GASQEIHDEV KRLAQKKVVV 120
  121 CSMGNLAASG GLYVSVACPK IVANPGTLTG SIGVISQFPN VKDLAEKLGV KVETVKTGKL 180
  181 KDAGNPFRDM TPEDRAYWQG LVENTLGQFV KAVAEGRKLD EAKVRAIADG RVLTGAQAKE 240
  241 AGLVDQLGNF YDAVELAKQE AKLSGEPVLV YPPDEHGRFL EQLMGGAAGA VADAVATRVA 300
  301 QGAADARQPG VYFLAR

Type	Start	End	Confidence
Cytoplasmic	1	13	0.86
Transmembrane Helix	14	38	0.88
Non-Cytoplasmic	39	316	0.95