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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|68355680
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPHKRIHEWE LSDATHEAPS APPQDVHLLS LSSTSIKVSW VAPPAASRHG AIVRYTVSYQ  60
   61 AVNGEDTERH EVPDIGADAS SCVLEGLEKW TEYQVWVRAH TDVGPGPEST AVRIRTNEDV 120
  121 PGAPPRKLEV EALNSTAIRV TWKPPLSGKQ HGQIRGYQVI YSRLENGEPR GHPNIMDVAL 180
  181 PEAQEAVIAG LASETSYSVT VAAYTTKGDG ARSKAKVVTT TGAVPGKPTM IISTTVGNTA 240
  241 LIQWQPPKDM VGELMGYRLR YKRLEEENYE IREFSRTDDH HTVTDLHKGA TYSFHLSARN 300
  301 RAGLGEEYVK DIGTPEDVPS GFPLNLQVVG LTTSTTRLTW EPPALSERNG RIIHYIVVYR 360
  361 DINSKQNSTN RTSDTQMTIQ GLRPDTTYDI RVQAFTSKGG GPISPSIQSR TMSTSPAFAT 420
  421 SFGVKAVMKT SVLLTWEVPE NYKSQVPFKI LYNQQSVEVQ GNLKRKLITR LQPDTDYSFV 480
  481 LMSRGNSAGG LQQQVSIRTA PDLFKTKPVL YTADQTNNGK LTINLPKVPT SAPVRCYYIV 540
  541 VVPVSQTSSR QWINPDEMEL DELLESSEGA HLRRRRRHTD TVRPYIAAKL STLPETFTLG 600
  601 DELDYSGFIN RPLPNNQHFQ CFVMAELKDQ YPVTANEKQR TFSASPYSDP IIVQGENQMQ 660
  661 RSVDQPEMLW VMGPVLAVVL IIIIVIAILL FKRKRASPLP KDDHSGGVKD CLLASSSDPV 720
  721 EMRRLNYQTP GMREHPPISV SELADHIERL KANDALRFSQ EYESIDPGQQ FTWENSNLEV 780
  781 NKPKNRYANV IAYDHSRVVL TPVDGVPGSD YINSNYIDGY RKQNAYIATQ GPLPETLSDF 840
  841 WRMIWEQRAS TIVMMTRLEE KSRVKCDQYW PIRGTETYGM IQVTMLDAVE LATYSVRTFA 900
  901 LYKNGSSEKR EVRQFQFMAW PDHGVPEYPT PILAFLRRVK ACNPPDAGPM VVHCSAGVGR 960
  961 TGCFIVIDAM LERMKHEKTV DIYGHVTCMR SQRNYMVQTE DQYIFIHEAL LEAATCGNTE1020
 1021 VPARNLYAHI QKLTQPSAGE TVTAMELEFK RLANSKAHTS RFISANLPCN KFKNRLVNIM1080
 1081 PFESTRVCLQ PIRGVEGSDY INASCIDGYR YLLIQTR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle