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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|68355012, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRRRKRVAT GDGVPSPRKE EKAPAPPRKE KKKKTDIGKV FINISIGLCI FSLIWFFYAL  60
   61 YMRSSLARRV VTLHPSPRVL DANSSSPAVS PERYWGSYRP QVYFGMKTRS PRSVVTGLMW 120
  121 MHQFAEMDGN LRHTCEQGDH LLGYGWLMHD GVSFGVQEIH DRDFTLTTEF VKRMGGDHGG 180
  181 DWTWRITAKQ HGTALSTPVV SLMFYASTDG QGSLQAHVEE KNRVSSVTGT SEELGNFKIT 240
  241 FGKPTAGEGA SAKYARYNFL QTRSPGLDKL TDIVKNSLNH KFIFSPPKGE KRSYFAVDTY 300
  301 KVTNHQNQQN DPKMESDFVV HQVTVQTPFQ IEVLFESGSF RERPNQLVGS VLTDELEKRK 360
  361 VAFDEKFEAT FGLQAKGFTS SHIKFAKAAL SNMLGGMGYF FGPSVVQSVY NEHPVLYPEG 420
  421 PLFTAVPSRS FFPRGFLWDE GFHQLLLSKW DTQLTQEVFA HWLDLINIEG WIPREQILDD 480
  481 EARSKVPSEF IVQHNENANP PTLFLALQEL LEQLDAELVS SQTMLPFLRK LYPRLQVWFE 540
  541 WFNTTQVGPV PNSYRWRGRD KDTNLFLNPK TLTSGLDDYP RASHPSADER HVDLYCWMTL 600
  601 ASGVMANVAR ILGEPHQVYE NTHRSLSNND LLNELHWSEN LHAFSDYGNH TQAVSLQQEK 660
  661 VFVPPGQPRH QFPVARLVRS VRRAPKLQYV NALGYVSLFP FLLHILTPDS PKIEHILQAI 720
  721 KDPERLWTPY GLRSLSRADP LYMKRNTEHD APYWRGPIWI NINYLAVRAL HHYGSIEGPY 780
  781 KEKAATLYQE LRTNLMNNVY KQYLETGYIW EQYNDSTGRG QGSHPFTGWS ALTVLIMAEK 840
  841 Y

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle