YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG34056-PA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYRNILCLVL GLIIGIQLTD FLEYFQLTDS QFASTSITQL EEGASQLATE EELALWLHNE  60
   61 TRVLCMVLTL PKNHQSRVRR VKGTWGRRCN KLIFISSQED RELGVIDVGV PEDRNNLYLK 120
  121 MRKALEYVYR NHGEDYDWFL KADDDTFVIM ENLRFLLYPY DPEAALYFGH RFRTTFPQGY 180
  181 MSGGAGYVMS RDALRRLNLF AFNNSQFCPI NNNSEDRQIG FCLQNVGVVA GDSRDEEGRD 240
  241 RFLPLSLKFM LPTFPTDNWL PKLTFYEPVN ETGSTSGISF HYVKIHEFEM YEYLLYRLHI 300
  301 FGTPLSQRTL PPRLGPDELQ NQLNQWAQEN STNSNAWLKQ E

Type	Start	End	Confidence
Signal Peptide	1	19	0.77
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	341	0.99