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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Ih-PE
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHVKHTQRRV SGPGAFGTFT NDQRASRDNL CPDNQQQQQQ RHSHSHQHLV RQSLVSLSNG  60
   61 QPAASAAPDS VSLLRAGDDQ QQHPQQPHLQ QQQQQQQHLQ QQQQRHRSSS SRLSTSGISK 120
  121 QNSSDSRSGL RILDSSHSPV SCGTQSVSST GGQSALYDAC HEYSRSLSAA AAEGAASLLK 180
  181 SHYSDQQLAQ TEPDPEPDPE RDRDRDRDRD RDRERERRHL TNLNLNLSSE YDYSGSDKQQ 240
  241 LVNETYIFKC IANSPSFLRT NKIKEQSKKL RNLSLKTRTA KKKGQIISKS NAVSDNSLHP 300
  301 GDKYLNLYLV EKKHSLQPQV ASTSSSINTT HPQASSAPAS SSSTCTKAPQ LPALSAVAAR 360
  361 QQQLLLNGSL KGKGQSQSQG QSRQTLPGHR ASVRSESGSG SSHTIPATGK SPPVPHSLAA 420
  421 KISSSASGSK NCNLLSASSN SCHKLNAHAQ GSGAGSGSGS GSGSGPPGHS HYAAASPKSS 480
  481 VSSNGHLNKY CLTDLTRRKA EFNRQLSAPT DYTHHSSSNG SQQEGSSEAN EGHEPVGEST 540
  541 ITVASAGVSY PHPYSYPYHY AHHASSATAP ANLKASLQLH SFGSHHPCPY PARPTSTSCT 600
  601 NSFNRRHIRR HKGKLGDRLL SGDSEESVRC SYCSVLNVND NDLRISFENT CTDSLVTAFD 660
  661 DEALLICDQG TEMVHFDDVS LYGTPKEEPM PNIPIVSEKV SANFLKSQLQ SWFQPTDNRL 720
  721 AMKLFGSRKA LVKERIRQKT SGHWVIHPCS SFRFYWDLCM LLLLVANLII LPVAISFFND 780
  781 DLSTRWIAFN CLSDTIFLID IVVNFRTGIM QQDNAEQVIL DPKLIAKHYL RTWFFLDLIS 840
  841 SIPLDYIFLI FNQIMKLQDF SDSFQILHAG RALRILRLAK LLSLVRLLRL SRLVRYVSQW 900
  901 EEVYILQNLQ KKSADRRGRM NRKDKDGLTK SNLILKFLNM ASVFMRIFNL ICMMLLIGHW 960
  961 SGCLQFLVPM LQGFPSNSWV SINELQESYW LEQYSWALFK AMSHMLCIGY GRFPPQSLTD1020
 1021 MWLTMLSMIS GATCYALFLG HATNLIQSLD SSRRQYREKV KQVEEYMAYR KLPRDMRQRI1080
 1081 TEYFEHRYQG KFFDEELILG ELSEKLREDV INYNCRSLVA SVPFFANADS NFVSDVVTKL1140
 1141 KYEVFQPGDI IIKEGTIGTK MYFIQEGVVD IVMANGEVAT SLSDGSYFGE ICLLTNARRV1200
 1201 ASVRAETYCN LFSLSVDHFN CVLDQYPLMR KTMETVAAER LNKIGKNPNI MHQKDEQLSN1260
 1261 PESNTITAVV NALAAEADDC KDDDMDLKEN LLHGSESSIA EPVQTIREGL PRPRSGEFRA1320
 1321 LFEGNTP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle