YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG33680-PA
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRQLTCPRVA SVGNCVIVVF NFLFPINIFL LAFTITPCAR NEPLLERCII NAAYQIRPLL  60
   61 VHGNLGDGFP TSPLEPLSLD NIELKLSSQF QAVFKDLEAN GGNYTGKYSL HLNLLLPDIK 120
  121 GKGNMQGYCE NAKAFVKIRG SRYLRNGKDY VKFSKMTTLI DFKDFKLKLA NLFSGDRFLG 180
  181 DVGNSLINNN QELYLKDIAP SLEHGLSKHF LDVADKILAS ATFDEMFPPG KTFVSPITHP 240
  241 PRLPLSGVSP ALFEPPSFKF KIPKEVFYIK CPFKIDLN

Type	Start	End	Confidence
Cytoplasmic	1	11	0.85
Transmembrane Helix	12	35	0.85
Non-Cytoplasmic	36	278	0.97