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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG33958-PA
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNGKAHKSG ENPDPSPCPA GGSRMPTPSV KIDISTCQSN RPMESRTAPD DVNPSGEGGL  60
   61 LLVPTHHNLQ LDKISVRSIS SEDISNGGSG RCCNAAARNP AIKTGRRLQL MQMIILPFIP 120
  121 ILALIVQTSV TLQEILEYRS AVADIETQVT IATDLGKVVT RLQLERSEVA FYIFTNGSKQ 180
  181 RANLTLRFAN TDHALNNMTT WSEISVPTAP DEDEDDREMM LNRYEFQSRL NEFRDRVRLE 240
  241 PEESSITEVM NWYTSINRGL LHHLSEQIKE TDNSGVWRYL VGFKNLLKSI ECQNIATSFG 300
  301 IRYYGRGSLT AENFVSYVRY EFMAREMINS TLNYAPMLKN MYTNITSTKK FHRAKQMGTT 360
  361 LLKNNPNVSN ERSAIEYYEL MNNYTDDLRI LQKALRRLIK EYVDKTLVEA DRKEAIGIAI 420
  421 LVVVLIVSPV IIVLVKNAAA TIQLYALNLS QKAKELKREK RKSDSLLFQM LPPSVAMQLK 480
  481 QTQQVPAELY EAVTIYFSDI VGFTEIAADC TPLEVVTFLN SIYRVFDERI ECYDVYKVET 540
  541 IGDSYMVASG LPVKNGNKHI SEIATMALDL LDASSVFRIP RAGDEFVQIR CGVHTGPVVA 600
  601 GIVGTKMPRY CLFGDTVNTA SRMESTGEAQ KIHITEEMHD SLQQVGGFRT EHRGLIDVKG 660
  661 KGLMSTYWLT CKDGPVRARE EISWRADIQP VFLDHLKLHP PTDYKLPKRK 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle