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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: hang-PB
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCDAAAATAT TTTTAAVAAA VATTTASVAL EATATQPGTT TTTVATASAG TTSPEAAIPT  60
   61 AATATSARNS NSERSARQNC CRLCIAPQTE CISIINSYAA DKEPLSTKIH NCVGIKVTPQ 120
  121 DRLSQQICHA CISYLNSWQS FKNRCFSSQA KQRQWLDTNK SKLLNYLDLN SAENGGGGFF 180
  181 DQHLHQQQQH HQHLENELEA EKEKATPTAA STAANILDGI HSLKKRKSLT VYPLPAMPIK 240
  241 DEPIDTDDDY QMKSIDESDD MVDPTMFLER SEHEGDVPLT ASDYDYTAQH GVNASSVAAS 300
  301 LPPNAVANVA AAGDSKVASC RACSLQFSTR ANARRHERNL HPNLFQLSTD SPHNTPITKP 360
  361 TPALAAALEM QRAAAAAATA EANRAAGAAG GNISTQKYRQ VVMNAFIKCE GGGYDYDNPE 420
  421 QYRPLLTRDK VEFIEQNDEF LEQYQTMTCR CCNKYFSTYK NFMAHVRKKY PQLPRNLCFN 480
  481 CLKMNDSKAL FISHLKKRNC INLFRVLNAL RGKTTTVVVP IADDVADDGA TGSIPVADAG 540
  541 AGVVAMNSPT VTASGEVVTP GGGSERPEKL RAKELLVNKL YECKLCPKGF RTKHEFRTHV 600
  601 YDKHADVQRK DNNSIQCSFC GLDFADPVDR RRHYNNMDCI VRLRCMTCDA KLETHQRFLD 660
  661 HVYQDHLGGV GGGAVSDNAS TTGSGMARSN SMEHSPGKRS LLGALGVGSS AEESRSSSAA 720
  721 PPLTSTPKLA GGNQVGGGGS TSASAAAAAQ SSANRDASAP KSQYFSRMPQ VCPICGQQYN 780
  781 NYNNVLRHME SKHPNKLPET YKCVRCGLGY PRISYLREHM INVHGVDKNR HSGGFEYIVN 840
  841 ADAVKLADGS TPNVYTGRYD YVMKDLMSIT NDDEEEEPGS VAKKMRLDDS SNNSSLVGVA 900
  901 SQQKECPICN AVFSNNIGLS NHMRSHYTAS NAVNAALAAA NRMTPKSLTI TATPATDSEL 960
  961 GVGGTMSESA PATPANVPPA MANQTPQEQA VFRRSLDQAA DRRFRRMRCR ICQRRFSSKK1020
 1021 SYRYHMLTDH QVQNVQFIKC KLCNAEFAYE KGLKVHLFKV HGKAIKDEMI IKQFECDVCS1080
 1081 IVYSSESELQ QHKRSVHKLT SASASTSAST SSKIDDDSLM DDGKPTSSDL ADLSTLAAGG1140
 1141 STASAPLYWY QCKYCPSNFN TNKKLAIHIN SHDEFDSNDY SCKDCGNVYS GRKSLWVHRY1200
 1201 KKHPQVPNPA ECSLCRKVFF DRQMHDNHTP TCNRKPITST GAHQQQDGQL HSHHTAKRTI1260
 1261 FRHKTGDDDD EEDDDEQQQL EERANSDGNG TTVGVASGST AAAGTSLKIR IPEVACTICG1320
 1321 ARFTDQEHFS KHIQKHEQEL YVDNPLAAMF DDGPADAGQF QVERQNENGE YACDLCAKTF1380
 1381 PQVIALKVHR KWHFRGDSKQ NPIDGEATQL TNNNHTTNNN NNNSMHLREL HAVGLMPNQQ1440
 1441 QQSLNNSCNS SMNHNNNSSS NRSKSMKRKR ELKCEYCAST FISNNNLRRH MYELHKHEVS1500
 1501 NLPEPPVIVV DDHLTCRRCQ LKFDTKELWI EHKLADAKVV RPFCPFQWGC DLCGEYLSRK1560
 1561 EKLMNHINNH LKEEVIVPVA TKAAIERTAA MESAAADANA AATLSALGEG AETEDQFAEK1620
 1621 VEAAGATTTD KLTNPDEEDS DDLDEDSSGD DDDSSGTGDD DDDDDSDDDE DGEGEDEDEE1680
 1681 GDGGEGEDEE GVQPPAQLLP QQQHKTDLNL NQDDDDLVEE VISSDDDEDD DGEVESDDDD1740
 1741 EDDDDEEDDV EEPEPVGLTV RPLMNGKSKM PPLIVASSDD EDDGVMPIED IIEEEFDEDA1800
 1801 DPDPEDAIEE VDEDDLDEGE VEDEPNVVST ASFSESESST TTTSNSHSHS HSTGERRKKA1860
 1861 VDQLNDPGFT CDLCQLCFDS QELLQSHIKS HILNGPKLST VSAAAAAQVR QIE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle