YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Axs-PB
Protein type:	Transmembrane
Type Confidence:	0.87
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEDAKSPGP RTRNIIENQL FRRQRSLKLE ALQRQRTLDS NDGVEGLGAD TEPFDKTHIV  60
   61 IIFTEKAKLR HCQDVEKIIQ EFGIQTTLEI VGKTEKYLYL SASVDTLLRL ADAAELEKMT 120
  121 TTHSMQKFNH GCISDFLLPG MGKEQILRYC EIPVLIKDVI QDGIKSYVQK GYIEDMFPLH 180
  181 DILYLERFNW NLKRTKLPIE DIRNYFGSSI GLYFGFIEFY TKALIFPSLF GILQYVFDLN 240
  241 ISLVCSFYVV WTTVS

Type	Start	End	Confidence
Cytoplasmic	1	201	0.77
Transmembrane Helix	202	221	0.64
Non-Cytoplasmic	222	230	0.63
Transmembrane Helix	231	252	0.73
Cytoplasmic	253	255	0.53