YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	AlCR2-PC
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGGWWRGGG GGGRLGGKAI MEGHSTPNGA AASHRNNSTR TNIATNGCAH SGILLFVLTA  60
   61 MTLTSLITPT EQLAVAPNGT TLHQLESVES ESYPSINGTQ NETMVTSVRP HLDHRNRPTQ 120
  121 QNGSHYLEYD DDGPDCSYSY NFILKLITMI LYALVCIIGL FGNTLVIYVV MRFSKMQTVT 180
  181 NIYILNLAIA DECFLIGIPF LLYTMQVGNW PFGNYMCKAY MVSTSITSFT SSIFLLIMSA 240
  241 DRYIAVCHPI SSPRYRTPFV SKLVSAFAWM TSVLLMLPVI LFASTVQSSN GNVSCNIEWP 300
  301 DTQNSHTDST FILYSLVLGF ATPLTFILVF YCLVIRKLHT VGPKHKSKEK KRSHRKVTKL 360
  361 VLTVISAYIF CWLPHWISQV TNCIHYSLKT FIFLAVFLAC GCLSYSNSAM NPILYAFLSD 420
  421 NFKKSFMKAC TCAARKDVNA QLQLENSFFP KFGKGRQSER LLGGNGKGGA QRGALTKKKC 480
  481 LATRNNNAPM ATTTTTTTTT TGTDAVTCLQ PPVHQVPAEI QVGNPATVLV VNAETNNCKP 540
  541 PVLHTDL

Type	Start	End	Confidence
Cytoplasmic	1	46	0.91
Transmembrane Helix	47	67	0.86
Non-Cytoplasmic	68	147	0.97
Transmembrane Helix	148	170	0.93
Cytoplasmic	171	181	0.86
Transmembrane Helix	182	203	0.94
Non-Cytoplasmic	204	218	0.89
Transmembrane Helix	219	240	0.87
Cytoplasmic	241	258	0.87
Transmembrane Helix	259	283	0.86
Non-Cytoplasmic	284	311	0.94
Transmembrane Helix	312	335	0.93
Cytoplasmic	336	355	0.96
Transmembrane Helix	356	377	0.93
Non-Cytoplasmic	378	387	0.81
Transmembrane Helix	388	409	0.83
Cytoplasmic	410	547	0.97