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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|86129576, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADGPDEYDT ETGCVPLLHP EEIKPQSHYN HGYGEPLGRK THVDDYSTWD IVKATQYGIY  60
   61 ERCRELVEAG YDVRQPDKEN VTLLHWAAIN NRIDLVKYYI SKGAIVDQLG GDLNSTPLHW 120
  121 ATRQGHLSMV VQLMKYGADP SLIDGEGCSC IHLAAQFGHT SIVAYLIAKG QDVDMMDQNG 180
  181 MTPLMWAAYR THSVDPTRLL LTFNVSVNLG DKYHKNTALH WAVLAGNTTV ISLLLEAGGN 240
  241 VDAQNVKGES ALDLAKQRKN VWMINHLQEA RQAKGYDNPS FLRKLKADKE FRQKVMLGTP 300
  301 FLVIWLVGFI ADLNIDSWLI KGLMYGGVWA TVQFLSKSFF DHSMHSALPL GIYLATKFWM 360
  361 YVTWFFWFWN DLSFLSIHLP FLANSVALFY NFGKSWKSDP GIIKATEEQK KKTIVELAET 420
  421 GSLDLSIFCS TCLIRKPVRS KHCGVCNRCI AKFDHHCPWV GNCVCAGNHR YFMGYLFFLL 480
  481 FMICWMIYGC VSYWGLHCET TYTKDGFWTY ITQIATCSPW MFWMFLNSVF HFMWVAVLLM 540
  541 CQMYQITCLG ITTNERMNAR RYKHFKVTTT SIESPFNHGC VRNIIDFFEF RCCGLFRPVI 600
  601 VDWTRQYTIE YDQISGSGYQ LV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle