YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|85723307, gi|...
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRHTVNTATC SFGSLPDEDS RRAKEMTESV EFHCKKNGSE ILSPSMKSSF FRFLLIGILL  60
   61 VGGFTGCGET DSSPQQARQQ APGTPAYGDI IVEGSIGDAS NLIPLLSSDS TSHEIAGLVY 120
  121 NGLVKYDKNL KITGDLAESW GISPDGLIIT FHLRHNVRWH DGHPFTAEDV LFTYQLTIDP 180
  181 KTPTAYAGDF LKVKKAEVLD AHTFRVTYDK PFAPALMSWG SAIMPKHLLA GQDITRTPLA 240
  241 RKPVGTGPYK FKEWVAGQKI VLVSNPDYYE GRPYIDGYIL RIIPDMATMF LELRAGGIDR 300
  301 MGLTPLQYTR QTENPLFRKN YNKFRYLSFA YTFVGYNLGN PLFADRRVRQ ALAYAIDKEE 360
  361 IIQGVLLGLG KPATGPFKPG TWAYNPNVPT FPHDPGKARA LLAEAGWLDR NGDGILDRNG 420
  421 QPFAFELLVN QGNEVRAKCA EIIQRRLAEI GISVKIRVVE WAAFVNDFIN KRRFDATILG 480
  481 WTIPLDPDLY DVWHSSKTGP QELNFTSFKN EEVDRLLEKG RGTFDLNERK RCYDRIQEIL 540
  541 AEEQPYTFLY VPDALPIVQA RFRGIELAPL GIGHNFIKWY VPAPEQRFIM TR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle