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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|85721432, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNADSKAEED RHVDPVCSMV VSSDSEYYYD YKEKHYYFCS EHCLRKFKEH PEQYLNKEIS  60
   61 PSPEKYNKLI TCTCPMHPEI KQQGPGNCPK CGMALEPVEV QAAATKTVYT CPMHPEVVQD 120
  121 HPGNCPKCGM ALEPVKFRVE EKNEELIYMS RRFWVCTILA LPVFFLAMVA DMMPAWLPNW 180
  181 LSMQAVQWIE FALASPVVLW GGWPFFVRGW QSVQTWNLNM FTLIALGVSV AWIYSVVALL 240
  241 FPQIFPLIMQ MESGLVPVYF EAAAVITTLV LLGQVLELRA RSRTNAAIQM LLGLAPNTAR 300
  301 IVRNDGTEED VPLEHVQPGD TLRVRPGEKI PVDGTVIDGE SNVDESMVTG EPIPVAKLAG 360
  361 EKLIGATVNG TGSLLMRAEK VGSDTLLAQI VDMVAEAQRS RAPIQKLADI VAGYFVPAVV 420
  421 GVAVVAFIAW WVWGPEPRLA HSIVNAVAVL IIACPCALGL ATPISIMVGT GRGALAGVLI 480
  481 KNAEALEIME KVDTLVVDKT GTLTEGKPKL VLVQAEAGFN EDEILRMAAS LERASEHSLA 540
  541 EAIVHGAEER GVTLVKANNF QSITGKGVTG EVDGHTVVAG NAKLLESSGI RAGDLLHQAD 600
  601 RQRVEGNTVM LIAINGKAAG LIGVADPIKD STTEAIRDLH ADGIKIVMLT GDSLTTAKAV 660
  661 AGKLGIDQVH AEVLPEQKAE LIKELQADGC IVAMAGDGIN DAPALAQAQV GIAMGTGTDV 720
  721 AIESAGITLI KGDLRGIVRA RRLSRATMRN IRQNLFFAFI YNTIGIPIAA GVLYPFFGIL 780
  781 LSPMIAAAAM SFSSVSVIGN ALRLRGAKL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle