YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|85721163, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMTRHPIIKV KGALFLLFIL MSPAFFSSAH AGVLTDETGR RVNVPAHPRR IVSLAPDITE  60
   61 ILFALGLEKE IVGVTRFSDY PEAARTRPKV GSYINLSLER ILGLHPDLVI GTTNGNRKEA 120
  121 VDKLAMAGIP VYVTNPQRFS NIAETIVNIG RITGRDAAAR KLAGEMKRKA DRIVSRTVDC 180
  181 RKPKVFVQID SNPLISIGRN TIYHELIGMA GGINIAGRAQ GKYPRYSMES VIKERPDVIL 240
  241 ISSMIGKASR KAALDSWSRW QDIPAVRNRR IYFIDSDLTD RFSPRIVHGL EKIAEILHPE 300
  301 CVRLEKTGRG KSR

Type	Start	End	Confidence
Signal Peptide	1	31	0.99
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	313	0.99