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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|85857536
Protein type: Transmembrane
Type Confidence: 0.89
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KVRTADASPE NPSLFRLLFR VLRAACERTV AYYEWRMRQV TRASSGQSQA LLSCLIIAVC  60
   61 AALIIQSGHI QGVKAQPGRE PGEVNSRQPG NGNGTTGHRV PRSVFHVRWN PNEKFIVESR 120
  121 ENPAINSSKL APHPRLKVSK NTKLTLSPKL YLCHDKHSEL CHNKTQQFRQ RIVRAFEKAM 180
  181 VESVNESQAN HYNVDYKPVF GDSFEEQYYP STCLVMEAGV RVLRRKDAPF NKLPFGRLFP 240
  241 RQKLFRNVKD IKTCAIVSSA GSLAGSKLGR FIDTHDIVMR FNHAPTQGHE VDVGSKTTIR 300
  301 VVNSQVVTKP EFDFTRAPIF RNVTIAAWDP GKYNGTLEDW LTSADYDLFS NYELYRRRYP 360
  361 KSRAFLIDPH SVWRLWQSLQ MFAGNRPISK NPPSSGFIGL ALLLPHCPQV DFVEYVPSTR 420
  421 LNGRCHYYSK EMNSACTFGS WHPLAAEKLM ALDMNMAEDD DMSVFQFGIL RIRRPDKLLC 480
  481 GFNFFGY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle