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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ome-PE
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAAGWLDMN AALQNLDSPP ETVKKARTKR RSSYAGRTTA TAGVHGRGSI GTISSGIIKS  60
   61 FRERFLSNSS GDSGKYRKLR QRDAESGRME ASGSSSSGEN EDPSSSSSVE DLFANEAERR 120
  121 NWHRKTSEKR RRNARKKNLM HTKEKKRRVR IILTVVTTVI AVALLATALV FILRTDEKDA 180
  181 DDSDSNSNNA IDLEDVLSGQ LYAKRFNGSW SNGNSLIYKE NTSIMEFDAK TGERSILLED 240
  241 AQHYVLYEKS ADGEFLLLAK NYKKNFRYSF LAEYDLYNLN TKEFIQLTIQ NEQHYLSMVQ 300
  301 WSPVGNALVI NYDRNLYYKE SALAQEIALT SDEQAGILNG IPDWVYEEEV FSSNVATWFN 360
  361 PSGTQLAFIK FDDSSTHLIN FPYYGDAGDL RYQYPLHQVI AYPKAGSSNP RVELVMVDLK 420
  421 RAVAGGDFVT VMPVPSALNT ETDYIVTVVS WVDDDNVLSI WMNRIQNAAY VVTFDGLNRK 480
  481 VIYSAESKTG WVDLYTAPFR NRNGSRLAFV LPHNNYKHVQ LLSSTVASSE PQALEPLTEG 540
  541 KYVVDSILHW DGKNDIIFYT ANTEDHPEQL HLYAIRALAK QSPKCLTCNL IKSGDVQQTY 600
  601 FSATFNDNNH IVITSLGPGI PTTHIYEWKY ENSQVVISKV LDWETNESLR AKLKGVALPS 660
  661 HKILTVDIDG GFQAKVLLQL PPNLDTSGAT KYPMLVDVYG GPDSYSVTNK WMVDWGTYLS 720
  721 SNQSVIYAKI DGRGSGLRGE SLLHAIYLKL GTVEISDQIN VTQKLSTLFN YIDPDHVGIW 780
  781 GWSYGGYAAA MALANDEAKV FKCAASIAPV TDWAYYDSIY TERYMGLPNT NELGYANSRL 840
  841 STMAVKLRGK KYLLVHGTLD DNVHYQQAMI LAKNLERQDI LFKQISYADE DHGLSNVRPH 900
  901 LYHSLDRFFG ECFASSRLMK SAK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle