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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|66551782
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.41
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IIGGGIGGAA SSHFLAELFK NNLNIDLYEA KTIGGRLATI KINNNEFEAG GSVIHSQNKY  60
   61 MQEFVKLLGL EHRSFSDKKT SIWNGNEIVF EESKWELLSL IKLIYKYGIQ PFSLNRYTTS 120
  121 IINNFEKIYH LQDSGKTFTN ISSFLLSINT EFPKLTQKSI KNVLLDLGYS EKIINEIVKT 180
  181 TLVVNYGQDI NVHSFVGFVS LAGAAFNLWS VKGGNKKVPE HLIYRNKHLN VVPSYVIKII 240
  241 NIPQNDTQNL YEVHYCNQAT FVKADLKPHY FGLQEELDNI LSCEPNKTII NSVGRLNSVD 300
  301 GIIKNSKVQE TKQIFWKAYP EYSTKIHEAK FKLHDALYHV NAIEWIASAM EMSAIEQPLI 360
  361 HDNETKIYEE NIKKHEDTTL TNEVMDSSFY PKIMLFLLLW YLISGCTLFL NKYILSYMEG 420
  421 NPTILGACQM LITTVCGFIQ MYFPCGMYKA RPRLMRPAGF YKHMILVGCT RFTTVVLGLI 480
  481 SLNYVAVSFT ETIKSSAPLF TVLISRYLLG EHTGLYVNLS LIPLMGGLAL CSINEISFDL 540
  541 RGFIAAMATN VTECLQNVYS KMLISGDNFR YTPAELQFYT SLASIVVQIP VLILFVDLPT 600
  601 LEHSLSSKLF IAFLLNGVFF HFQSITAYVL MNYISPVTHS VVNTAKRASL IWLSVLLFNN 660
  661 PVTSLSAMGT SLVIIGVLLY NRAQEYDKLN KAKLRYNSK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle