YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|66548725
Protein type:	Transmembrane
Type Confidence:	0.73
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLVGLTGGI ATGKSSVAAV FQEFGIPVID ADQIARKVVE PGKPAWHKIR KEFGLEIFLD  60
   61 TDELDRAKLG DLIFNDIEKR KKLNAITHPY IYKKIYWQAF KYFLQGHQFI LMELPLLFET 120
  121 GHMLNYLHKI IVVTCEEDLQ LQRLMERTGF TEAKAKLRIA AQMSLEKKAE MANFVIENSG 180
  181 SEYDTRQQSI RIINVLKASK YHWKLRFLVG FCCTILLAGV YWLKNRTLRS LLTIA

Type	Start	End	Confidence
Cytoplasmic	1	202	0.64
Transmembrane Helix	203	223	0.85
Non-Cytoplasmic	224	235	0.69