YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|66533071
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNSIRIIKK KLITLLIFAN IITLCSIVES SEIDNSNEES CHCNSRTFDR QTNIKNYYKK  60
   61 EIQDSCLAND ILHVYAKTVN SINHLKNMIK IKAGIFGIGT NDPIFIADGE GPKQQIYLNS 120
  121 FYIDKTEVSN HDFSKFVDAT NYKTEAERFG DSFVFRGLLK QKDQKNITLV VAQAPWWLQV 180
  181 KNANWLHPEG PESDIKNRMD HPVIHVSWND AIAYCNWLGK RLPTEAEWEV ACRGGLSDRL 240
  241 YPWGNKLIPN GQYRANTWQG DFPNNNTKED GYEGTSPVRE FPPNKYGLYN MIGNVWEWTF 300
  301 DWWTIEITTR GGFVNPTGPS QGINKVKKGG SYLCHKSYCF RYRCAARSQN TPDTTAGNLG 360
  361 FRCALSA

Type	Start	End	Confidence
Signal Peptide	1	30	0.91
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	367	0.99