YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|66525291
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASTVKFTSD ESLGESWVEL NPVPDRITPL PFSSGGEEYL RLLREAQRDS LPSSARHSLA  60
   61 SSRRGTPRDS PKSPPNSPNT ELSTEDELKG VYINYCCNKE SEFLEKNTDW IYEWSSRPDQ 120
  121 APPKDWKFKH PQGMNKRKSY SIRTTKVGKI GLFSKEVLYT LVITNILSVL VGAGLGVWLS 180
  181 RRGSITTSVT IE

Type	Start	End	Confidence
Cytoplasmic	1	156	0.77
Transmembrane Helix	157	179	0.88
Non-Cytoplasmic	180	192	0.79