YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|66522157
Protein type:	Globular with Signal Peptide
Type Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFHIAAAAV LTNIAFLEIY TLYDLPKIED ISFLSNKNPL QRVFVYGTLK RGEPNHCLIQ  60
   61 DTENGYAKFL GLGRTTIPYP LIIATDYNIP FLLKKPGFGH HVFGEVYDVD SKMLKKLDEL 120
  121 EEHPAFYKRS EENVLFAPES KVKSMDKFEE VSTLIKVWIY FLPKFKTSLL EKPMYSSYSN 180
  181 EGSHGLKYCE NEESTIRPED LF

Type	Start	End	Confidence
Signal Peptide	1	17	0.70
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	202	0.98