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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|85719350
Protein type: Globular with Signal Peptide
Type Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRSRRRSPY GAYLCAVISA VLLLLSVSLL YSRLSLSNSN PPSNPRTLLS DSISDEDSDL  60
   61 STTSDPIDEL DFIDLDQQQQ QQQTQPPPTN PYFFDPITSS IRRSFKTPPI FTSSITTDDF 120
  121 TILSPPQDPS KFAFTSDDIP LDDEVRRKAT VITSIEDALL LKSPSLREIW GEWFDKKSVF 180
  181 LRKDKMLKSS FEAFNPMLNP LLQDPDSVGV SSLTRGDKVL QKWWINEFKK VSFSVHKNTN 240
  241 NNGNLVTVAK GGTERRTLKL NDNGDNHIYA DGNNWGYFPE LPLRLSFNDF MDAFFRKGKC 300
  301 VMRVFMVWNS PPWMFTVRYQ RGLESLLFHH PNACVVVFSE TIELDFFKDS FVKDGYKIAV 360
  361 VMPNLDQLLE GTPANIFSTV WFEWRKTKFY STHYSELIRL AALYKYGGIY LDSDIIVLKP 420
  421 ISFLNNSVGM EDQAAGSSLN GALMAFGRHS LFIKECLEEF YMTYDDNSLR WNGADLLTRV 480
  481 AQKFVGEENK TIKQLELNKE PSHVFYPINS HDITRYFVAP TTEMDKAQQD VLLEKILHES 540
  541 LTFHFWNSLT SALVPEPDSL VAKLMNYACI RCLELL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle