YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|62717816, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSSSAMAVG ALSSSLLVTC CLMVALCSPS IPLEKLAQAP EQPGQEKREH ASRDSPGRVS  60
   61 ELGRASRDEG SSARDWKSKG SRALSGREAW SKQKQAWAAQ SGSAKAADWQ VRPRGDTPQG 120
  121 EPPAAAQEAI SLELMPTPEL PEEYAYPDYR GKGCVDESGF VYAIGEKFAP GPSACPCLCT 180
  181 EEGPLCAQPE CPRLHPRCIH VDTSQCCPQC KERKNYCEFR GKTYQTLEEF VVSPCERCRC 240
  241 EANGEVLCTV SACPQTECVD PVYEPDQCCP ICKNGPNCFA ETAVIPAGRE VKTDECTICH 300
  301 CTYEEGTWRI ERQAMCTRHE CRQM

Type	Start	End	Confidence
Signal Peptide	1	27	0.99
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	324	0.99