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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109486593, gi...
Protein type: Transmembrane
Type Confidence: 0.82
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGGSGDAER RQRWGRLFEE LDSNKDGRVD VHELRQGLAR LGRGDPDRAQ QGISSDWDSD  60
   61 ADGGLSLEEF TQYLQEREQR LLLMFHSLDR NQDGHIDVSE IQQSFRALGF SISMEQAEKI 120
  121 LHSMDRDGTM TIDWQEWRDH FLLHSLENVE DVLYFWKHST VLDIGECLTV PDEFSKQEKL 180
  181 TGMWWKQLVA GAVAGAVSRT GTAPLDRLKV FMQVHASKSN RLNILGGLRN MVQEGGLLSL 240
  241 WRGNGINVLK IAPESAIKFM AYEQIKRAIC GQQETLHVQE RFVAGSLAGA TAQTIIYPME 300
  301 VLKTRLTLRR TGQYKGLLDC ARRILEREGP RAFYRGYLPN VLGIIPYAGI DLAVYETLKN 360
  361 RWLQQYSHES ANPGILVLLA CGTISSTCGQ IASYPLALVR TRMQAQASIE GGPQVSMVGL 420
  421 LRHILSQEGV WGLYRGIAPN FMKVIPAVSI SYVVYENMKQ ALGVTSR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle