YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109514146, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPQRTAGSS FPRLLNLGSL GSGDTASGTE RRTAGTGPGR TMLRGKSRLN VEWLGYSPGL  60
   61 LLENDPLAAG RTPRTPRGNE NSLAATLKTL LFFTALMITV PIGLYFTTKS YIFEGALGMS 120
  121 NRDSYFYAAI VAVVAVHVVL ALFVYVAWNE GSRQWREGKQ D

Type	Start	End	Confidence
Cytoplasmic	1	83	0.98
Transmembrane Helix	84	107	0.86
Non-Cytoplasmic	108	124	0.92
Transmembrane Helix	125	148	0.93
Cytoplasmic	149	161	0.96