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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109511692, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQPPWGLALP LLLPWVAGGV GTSPRDYWLP ALAHQPGVCH YGTKTACCYG WKRNSKGVCE  60
   61 AVCEPRCKFG ECVGPNKCRC FPGYTGKTCS QDVNECAFKP RPCQHRCVNT HGSYKCFCLS 120
  121 GHMLLPDATC SNSRTCARIN CQYSCEDTAE GPRCVCPSSG LRLGPNGRVC LDIDECASSK 180
  181 AVCPSNRRCV NTFGSYYCKC HIGFELKYIS RRYDCVDINE CTLNTRTCSP HANCLNTQGS 240
  241 FKCKCKQGYR GNGLQCSVIP EHSVKEILTA PGTIKDRIKK LLAHKHTMKK KVKLKNVTPR 300
  301 PTSTRAPKVN LPYSSEEGVS RGRNSGGEQK RKEERKRKRL EEEKSEKALR NEVEQERPLR 360
  361 GDVFSPKVNE AEDLDLVYIQ RKELNSKQEH KDLNISVDCS FDLGVCDWKQ DREDDFDWNP 420
  421 ADRDNDVGYY MAVPALAGHK KNIGRLKLLL PNLTPQSNFC LLFDYRLAGD KVGKLRVFVK 480
  481 NSNNALAWEE TKTEDGKWKT GKVPLYQGID TTKSVIFEAE RGKGKTGEIA VDGVLLVSGL 540
  541 CPDDFLSEEG 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle