YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109508293, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATNPWDPA SAPSAAGLLL NHLVASGIVT EEMLDISRNT APCFVNFSRL QQISDLQAEI  60
   61 YQNNLEIELL KLEKDTADLI HPTYLVEKYD VLQSMNNHLE AVLKEKHTIR QRVLRPMCQE 120
  121 NLPMEAVYHR YMVHMLELAV TFIEKMETNL EIIRNIPHLD ANLKKMSKAL AKMDILVNKT 180
  181 EELAENILKW RDLQKEISLY IPRMLTEKNH LHELDIVPPL PFLSKAHTET SDAK

Type	Start	End	Confidence
Signal Peptide	1	25	0.73
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	234	0.98