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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|62664487, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVRSRRPWV SVALGLVLGF TAASWLIAPR VAELSEKRRR GSSLCSYYGR SATGPRADAQ  60
   61 QLLPQPQSQP RLQQSPPPAS HQLPGPLRPE VAPGGPSLRS SPWQQPAPLP QRRRGHKPEG 120
  121 ATALPGAPAA KGEPEEEDGG AAGPRKGGRP RSSQNGSGDG GAAAPTSGPG DFLYVGVMTA 180
  181 QKYLGSRALA AHRTWARFIP GRVEFFSSQQ PPSAALGQPP PPLPVIALPG VDDSYPPQKK 240
  241 SFMMIKYMHD HYLDKYEWFM RADDDVYIKG DKLEEFLRSL NSSKPLYLGQ TGLGNTEELG 300
  301 KLGLEPGENF CMGGPGMIFS REVLRRMVPH IGECLREMYT THEDVEVGRC VRRFGGTQCV 360
  361 WSYEMQQLFH ENYEHNRKGY IQDLHNSKIH AAITLHPNKR PAYQYRLHNY MLSRKISELR 420
  421 YRTIQLHRES ALMSKLSNSE VSKEDQQLGM MPSFNHFQPQ ERNEVMEWEF LTGKLLYSAA 480
  481 ENQPPRQSIN SILRSALDDT VLQVMEMINE NAKSRGRLID FKEIQYGYRR VDPMHGVEYI 540
  541 LDLLLLYKRH KGRKLTVPVR RHAYLQQPFS KPFFREMEEL DINSLVESIN SGTPATGFSF 600
  601 ISNSLKILSS LQEPKEIGGH NEKKVHILVP LVGRYDIFLR FMENFESTCI IPKQNVKLVI 660
  661 ILFSRDSGQE SIKHIELIQE YQNRYPSAEM TLIPMKGEFS RGLGLEMGSS QFDNDTLLLF 720
  721 CDVDLIFRGD FLQRCRDNTV QGQQVYYPII FSQYDPKVTR MGNSPTEGDF VFSKETGFWR 780
  781 DYGYGITCIY KSDLLGAGGF DTSIQGWGLE DVDLYNKVIQ SGLRPFRSQE VGVVHIFHPV 840
  841 HCDPNLDPKQ YKMCLGSKAS TFASTMKLAE LWLEKHLGVR DNRTLS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle