YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|62662570, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKVSALLCV CAAAWCSQTL AAAAAVAVAG GRSDGGNFLD EKQWLTTVSQ YDKEVGQWNK  60
   61 FRDEVEDDYF RTWNPGKPID QALDPARDPC LKTKCSRHKV CITQDAQTAL CISHRRLTHS 120
  121 MKEVGGSHKQ WRGLPSSTCK QCPIAYASPV CGSDGHSYSS QCKLEYQACV LGKQISIKCE 180
  181 GRCPCPSDKS MSTGRNVKRA CSDLEFREVA NRLRDWFKAL HESGSQNKRT KALLRPERSR 240
  241 FDTSILPICK DSLGWMFNRL DTNYDLLLDQ SELGSIYLDK NEHCTKAFFN SCDTYKDSLI 300
  301 SNNEWCYCFQ RQQDPPCHTE LSKIQKRQGI KKLLGQYLPL CDEDGFYKPT QCHGSVGQCW 360
  361 CVDRYGNEVV GSRINGVADC AIDFEISGDF ASGDFREWTD DEGEEDDMND KDDIEDDDED 420
  421 EGDDDDDGDD HDGYI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle