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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: TUTLA_RAT
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIWCLRLTIL SLILSQGADG RRKPEVVSVV GRAGESAVLG CDLLPPAGRP PLHVIEWLRF  60
   61 GFLLPIFIQF GLYSPRIDPD YVGRVRLQTG ASLQIEGLRV EDQGWYECRV LFLDQHSPEQ 120
  121 DFANGSWVHL TVNSPPQFQE TPPLVLEVKE LEAVTLRCVA LGSPQPYVTW KFRGQDLGKG 180
  181 QGQVQVRNGT LWIRRVERGS AGDYTCQASS TEGSVTHTTQ LLVLGPPVIV VPPNNNTVNA 240
  241 SQDVSLACRA EAYPANLTYS WFQDRINVFH ISRLQSRVRI LVDGSLWLQA TQPDDAGHYT 300
  301 CVPSNGFPHP PSASAYLTVL YPAQVTVMPP ETPLPIGMRG VIRCPVRANP PLLFVTWTKD 360
  361 GQALQLDKFP GWSLGPEGSL VIALGNEDAL GEYSCTPYNS LGTAGSSPVT RVLLKAPPAF 420
  421 IDQPKEEYFQ EVGRDLLIPC SARGDPPPIV SWAKVGRGLQ GQAQVDSNNS LILRPLTKEA 480
  481 HGRWECSARN AVAHVTISTN VYVLGTSPHV VTNVSVVPLP KGANVSWEPG FDGGYLQRFS 540
  541 VWYTPLAKRP DRAHHDWVSL AVPMGATHLL VPGLQAYTQY QFSVLAQNKL GSGPFSEIVL 600
  601 SIPEGLPTTP AVPRLPPTEM PPPLSPPRGL VAVRTPRGVL LHWDPPELIP ERLDGYILEG 660
  661 RQGSQGWEIL DQGVAGTEIQ LLVPGLIKDV LYEFRLVAFA DSYVSDPSNI ANISTSGLEV 720
  721 YPSRTQLPGL LPQPVLAGVV GGVCFLGVAV LVSILAACLM NRRRAARRHR KRLRQDPPLI 780
  781 FSPRGRSGPH SAPGSDSPDS VTKFKLQGSP VPSLRQSLLW GEPARPPSPH PDSPLGRGPL 840
  841 PLEPICRGPD GRFVMGPTVA PPQEKLCLER SEPRTSAKRL AQSLDCSSSS PSGVPQPLCI 900
  901 TDISPVGQPP AAMPSPLPGP GPLLQYLSLP FFREMNVDGD WPPLEEPTPA SPPDFMGSHP 960
  961 CPTSSFLPPP DSPPTNLRAV LPGTLMGVGV SSEPPYTALA DWTLRERVLP GLLSAAPRGS1020
 1021 LTSQSSGRGS ASFLRPPSTA PSAGGSYLSP APGDTSSWAS GPERWPRREH VVTVSKRRNT1080
 1081 SVDENYEWDS EFPGDMELLE TWHPGLASSR AHPELEPELG VKTPEKSCLL NTTHAPGPEA1140
 1141 RCAALREEFL AFRRRRDATR ARLPVCQQSI SYPEQATLL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle