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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|62659353, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHSSPLLLAL CLCVVLCALA RAGSDPQPGP GRPACPAPCH CQEDGIMLSA DCSELGLSEV  60
   61 PADLDPLTAY LDLSMNNLTE LQPGLFHHLR FLEELRLSGN HLSHIPRQAF SGLHSLKILM 120
  121 LQSNQLRGIP AEALWELPSL QSLRLDANLI SLVPERSFEG LSSLRHLWLD DNALTEIPVR 180
  181 ALNNLPALQA MTLALNRIRH IPDYAFQNLT SLVVLHLHNN RIQHVGTHSF EGLHNLETLD 240
  241 LNYNELQEFP VAIRTLGRLQ ELGFHNNNIK AIPEKAFMGN PLLQTIHFYD NPIQFVGRSA 300
  301 FQYLSKLHTL SLNGATDIQE FPDLKGTTSL EILTLTRAGI RLLPAGMCQQ LPRLRILELS 360
  361 HNQIEELPSL HRCQKLEEIG LQHNRIWEIG ADTFSQLSSL QALDLSWNAI RAIHPEAFST 420
  421 LRSLVKLDLT DNQLTTLPLA GLGGLMHLKL KGNLALSQAF SKDSFPKLRI LEVPYAYQCC 480
  481 AYGLCANFFK TSGQWQAEDF HAEEEEAPKR PLGLLAGQAE NHYDLDLDEL QMETEDSKPH 540
  541 PSVQCSPVPG PFKPCEHLFE SWGIRLAVWA IVLLSVLCNG LVLLTVFAGG PSPLSPVKLV 600
  601 VGAIAGANAL TGISCGLLAS VDALTFGQFA EYGARWETGL GCQATGFLAV LGSEASVLLL 660
  661 TLAAVQCSVS VTCVRAYGKA PSPGSVRAGA LGCLALAGLA AALPLASVGE YGASPLCLPY 720
  721 APPEGRPAAL GFAVALVMMN SLCFLVVAGA YIKLYCDLPR GDFEAVWDCA MVRHVAWLIF 780
  781 ADGLLYCPVA FLSFASMLGL FPVTPEAVKS VLLVVLPLPA CLNPLLYLLF NPHFREDLRR 840
  841 LWPSPRSPGP LAYTAAGELE KSSCDSTQAL VAFSDVDLIL EASEAGQPPG LETYGFPSVT 900
  901 LISRHQPGAT RLEGNHFVEP DGTKLGNPQP PMNEELLLRA EGATLADCSA GGALWPSGPL 960
  961 FASHL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle