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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|62658322, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESLLPKDCR LPDLLPSPKQ SMEAPLQTGM VLGVMIGAGV AVLVTAVLIL LVVRRLRVQK  60
   61 TPAPEGPRYR FRKRDKVLFY GRKIMRKVSQ STSSLVDTSV STTSRPRMKK KLKMLNIAKK 120
  121 ILRIQKETPT LQRKEPPPSV LEADLTEGDL ANSHLPSEVL YMLKNVRVLG HFEKPLFLEL 180
  181 CRHMVFQRLG QGDYVFRPGQ PDASIYVVQD GLLELCLPGP DGKECVVKEV VPGDSVNSLL 240
  241 SILDVITGHQ HPQRTVSARA ARDSTVLRLP VEAFSAVFTK YPESLVRVVQ IIMVRLQRVT 300
  301 FLALHNYLGL TNELFSHEIQ PLRLFPSPGL PTRTSPVRGS KRVVSTSGTE DTPKETSGRP 360
  361 LDPTGAPLPG PAGDPVKPTS LEAPSAPLLS RCISMPVDIS GLQGGPRSDF DMAYERGRIS 420
  421 VSLQEEASGG PQTASPRTPT QELREQPAGA CEYSFCEDES ATGGCPFGPY QGRQTSSIFE 480
  481 AAKRELAKLM RIEDPSLLNS RVLLHHAKAG TIIARQGDQD VSLHFVLWGC LHVYQRMIDK 540
  541 AEEVCLFVAQ PGELVGQLAV LTGEPLIFTL RAQRDCTFLR ISKSDFYEIM RAQPSVVLSA 600
  601 AHTVAARMSP FVRQMDFAID WTAVEAGRAL YRQGDRSDCT YIVLNGRLRS VIQRGSGKKE 660
  661 LVGEYGRGDL IGVVEALTRQ PRATTVHAVR DTELAKLPEG TLGHIKRRYP QVVTRLIHLL 720
  721 SQKILGNLQQ LQGPFPGSGL SVPQHSELTN PASNLSTVAI LPVCAEVPMM AFTLELQHAL 780
  781 QAIGPTLLLN SDIIRARLGA SALDSIQEFR LSGWLAQQED AHRIVLYQTD TSLTPWTVRC 840
  841 LRQADCILIV GLGDQEPTVG QLEQMLENTA VRALKQLVLL HREEGPGPTR TVEWLNMRSW 900
  901 CSGHLHLRCP RRLFSRRSPA KLHELYEKVF SRRADRHSDF SRLARVLTGN TIALVLGGGG 960
  961 ARGCSHIGVL KALEEAGVPV DLVGGTSIGS FIGALYAEER SASRTKQRAR EWAKSMTSVL1020
 1021 EPVLDLTYPV TSMFTGSAFN RSIHRVFQDK QIEDLWLPYF NVTTDITASA MRVHKDGSLW1080
 1081 RYVRASMTLS GYLPPLCDPK DGHLLMDGGY INNLPADIAR SMGAKTVIAI DVGSQDETDL1140
 1141 STYGDSLSGW WLLWKRLNPW ADKVKVPDMA EIQSRLAYVS CVRQLEVVKS SSYCEYLRPS1200
 1201 IDCFKTMDFG KFDQIYDVGY QYGKAVFGGW TRGEVIEKML TDRRSTDLNE SRRADILAFP1260
 1261 SSGFTDLAEI VSRIEPPTSY VSDGCADGEE SDCLTEYEED AGPDCSRDEG GSPEGASPST1320
 1321 ASEVEEEKST LRQRRFLPQE TGAQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle