YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|62658064, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTSLTTCEW KKVFYEKMEV AKPADSWELI IDPNLKPNEL GPGWKQYLEQ HASGRFHCSW  60
   61 CWHTWQSANV VILFHMHLDR AQRVGSVRMR VFKQLCYQCG TSRLDESSML EENIEGLVDN 120
  121 LITSLREQCY DEDGGQYRIH VASRPDTGLH RSEFCEACQE GIVHWKPSEK LLEEDAAFTD 180
  181 DSKRKGQAGF ISDFFSFRWC LFWGALCLVI VYLQFFRGRS GFL

Type	Start	End	Confidence
Cytoplasmic	1	193	0.71
Transmembrane Helix	194	216	0.89
Non-Cytoplasmic	217	223	0.69