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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157820855, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVPPRPLQL LGILFILSLS SVRLAQAGAY YGIKPLPPQI PPQIPPQIPQ YQPLGQQVPH  60
   61 MPLGKDGLSM GKEMPHMQYG KEYPHLPQYM KEIQPVPRVG KEVVPKKGKE IPLASLRGEQ 120
  121 GPRGEPGPRG PPGPPGLPGH GMPGIKGKPG PQGYPGIGKP GMPGMPGKPG AMGMPGAKGE 180
  181 IGPKGEIGPM GIPGPQGPPG PHGLPGIGKP GGPGLPGQPG AKGERGPKGP PGPPGLQGPK 240
  241 GEKGFGMPGL PGLKGPPGMH GPPGPVGLPG VGKPGVTGFP GPQGPLGKPG PPGEPGPQGL 300
  301 IGVPGVQGPP GMPGVGKPGQ DGIPGQPGFP GGKGEQGLPG LPGPPGLPGV GKPGFPGPKG 360
  361 DRGIGGVPGA LGPRGEKGPV GAPGIGGPPG EPGLPGIPGP MGPPGAIGFP GPKGEGGIVG 420
  421 PQGPPGPKGE PGLQGFPGKP GFLGEVGPPG MRGLPGPIGP KGEAGHKGLP GLPGVPGLLG 480
  481 PKGEPGIPGD QGLQGPPGIP GIAGPSGPIG PPGIPGPKGE PGLPGPPGFP GVGKPGVAGL 540
  541 HGPPGKPGAL GPQGQPGLPG PPGPPGPPGP PAVMPPTPSP QGEYLPDMGL GIDGVKPPHA 600
  601 YAGKKGKNGG PYEMPAFTAE LTVPFPPVGA PVKFDKLLYN GRQNYNPQTG VFTCEVPGVY 660
  661 YFAYHVHCKG GNVWVALFKN NEPMMYTYDE YKKGFLDQAS GSAVLLLRPG DRVFLQMPSE 720
  721 QAAGLYAGQY VHSSFSGYLL YPM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle