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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149052513, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQPRIPAAR GAAAGLQAQN GAASASGSPY TNGPVQHTLM SSQVSLSQGY DSQLPGSYPH  60
   61 PMPAKTLNPF SAQSNYGGSQ GSGQALNSPL VTSSPVPPSL HSGPVPRMAL PTSQNPAATP 120
  121 MPSGSFPPGT NPAPPLNWQY NHPSTGPQTN HFPHVAQPTI PGNTDFTADH PYVSSGDPAL 180
  181 QTSFKKPGSA LPLQNPPLPP TFQPGAPPGP PPAGGPPPSR GPVPQKTPPR AAFPPSLNSA 240
  241 VNQEGITSNA NTGSAAHSTY DEIEGGGFLA TPQLVNQNPK TSRSVGYAYP SLPPGYQNTA 300
  301 PPVAGMPPSS LNYPSGPQAF TQAPLGANHL TASMSGLSLH PEGLRVVNLL QERNMLPSTP 360
  361 LQPPVPNLLE DVQKLNCNPE LFRCTLTSVP QTQALLNKAK LPLGLLLHPF KDLVQLPVVT 420
  421 SSTIVRCRSC RTYINPFVNF LDQRRWKCNL CYRVNDVPEE FMYNPLTRVY GEPHKRPEVQ 480
  481 NATIEFMAPS EYMLRPPQPP VYLFVFDVSH NAIETGYLNS VCQSLLDNLD LLPGNTRTKI 540
  541 GFITFDSTIH FYSLQEGLSQ PQMLIVSDID DVFIPMPENL LVNLNESKEL VQDLLKTLPQ 600
  601 MFTKTLETQS ALGPALQAAF KLISPTGGRM SVFQTQLPTL GVGALKPREE PNQRSSAKEI 660
  661 HLTPSTDFYK KLALDCSGQQ AAVDLFLLSG QYSDLASLGC ISRYSAGSVY YYPSYHHQHN 720
  721 PVQVQKFQKE LHRYLTRKIG FEAVMRIRCT KGLSIHTFHG NFFVRSTDLL SLPNVNPDAG 780
  781 YAVQMSVEES LTDTQLVSFQ SALLYTSSKG ERRIRVHTLC LPVVSTLNEV FLGADVQAIS 840
  841 GLLANMAVDR SVTASLSDAR DALVNAVIDS LSAYRSSVLS SQQPGLMVPF SLRLFPLFVL 900
  901 ALLKQKSFQT GTNVRLDERI FAMCQVKNQP LVHLMLTTHP SLYRVDNLSD EGALNINDRT 960
  961 IPQPPILQLS VEKLSRDGAF LMDAGSVLML WVGRNCAQNF LSQVLGVQNY ASIPQTMTDL1020
 1021 PELDTPESAR MTAFISWLRE QRPFFPILYV IREESLMKAA FLQNLVEDRT ESALSYYEFL1080
 1081 LHIQQQVNK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle